Essays about: "stochastic reaction-diffusion simulation"

Found 4 essays containing the words stochastic reaction-diffusion simulation.

  1. 1. Diffusion and Camera-Noise Modelling for Analysis of Single-Particle Tracking Movies

    University essay from Lunds universitet/Beräkningsbiologi och biologisk fysik - Genomgår omorganisation

    Author : Erik Clarkson; [2022]
    Keywords : reaction-diffusion; camera-noise modelling; single-particle tracking; Gillespie simulations; Physics and Astronomy;

    Abstract : Interactions between T-cells and other body cells is an essential part of the immune system. It involves the binding between surface receptors of the two cells. Specifically, T-cell receptors (TCRs) bind onto pMHC (peptide-loaded major histocompatibility complex) molecules on the partnering cell surface. READ MORE

  3. 2. Mathematical modelling andsimulation for tumour growth andangiogenesis

    University essay from Karlstads universitet/Institutionen för matematik och datavetenskap (from 2013)

    Author : René Edgardo Luna; [2021]
    Keywords : Multiscale modelling; tumor growth; angiogenesis; agent-based model; variance reduction;

    Abstract : Cancer is a complex illness that affects millions of people every year. Amongst the most frequently encountered variants of this illness are solid tumours. The growth of solid tumours depends on a large number of factors such as oxygen concentration, cell reproduction, cell movement, cell death, and vascular environment. READ MORE

  4. 3. An Explorative Parameter Sweep: Spatial-temporal Data Mining in Stochastic Reaction-diffusion Simulations

    University essay from Uppsala universitet/Institutionen för biologisk grundutbildning

    Author : Fredrik Wrede; [2016]
    Keywords : Big data; feature extraction; clustering; stochastic reaction-diffusion simulation; spatial-temporal; data mining; cloud computing;

    Abstract : Stochastic reaction-diffusion simulations has become an efficient approach for modelling spatial aspects of intracellular biochemical reaction networks. By accounting for intrinsic noise due to low copy number of chemical species, stochastic reaction-diffusion simulations have the ability to more accurately predict and model biological systems. READ MORE

  5. 4. Simulation of stochastic reaction-diffusion processes on lower dimensional manifolds with application in molecular biology

    University essay from Institutionen för informationsteknologi

    Author : Siyang Wang; [2012]
    Keywords : ;

    Abstract : In this thesis, we simulate stochastically the reaction-diffusion processes in a living cell. The simulation is done in three dimension (3D) by MATLAB. The one dimensional (1D) polymers are embedded in the 3D space. The reaction and diffusion events occur both in the space and on the polymers. READ MORE