Essays about: "Denovo Assembly"

Found 2 essays containing the words Denovo Assembly.

  1. 1. RNA-Seq: Yellow Nutsedge (Cyperus esculentus) transcriptome analysis of lipid-accumulating tubers from early to late developmental stages

    University essay from SLU/Dept. of Animal Breeding and Genetics

    Author : Axel Thieffry; [2014]
    Keywords : Cyperus esculentus; transcriptome; tubers; RNA-seq; bioinformatics;

    Abstract : Thanks to high amounts of starch and oil amassed in the parenchyma of its tubers, yellow nutsedge (Cyperus esculentus) stands as a unique plant species with regards to nutrient biosynthesis and accumulation in underground organs. In the last decades, understanding of enzymatic processes in lipid, starch and sugar pathways underwent great improvements. READ MORE

  3. 2. Draft genome assembly and bioinformatic analysis of a denovo sequenced genome of Treponema phagedenis like strain V1

    University essay from SLU/Dept. of Animal Breeding and Genetics

    Author : Mamoona Mushtaq; [2010]
    Keywords : Treponema phagedenis like strain V1; Next Generation Sequencing Technologies; Denovo Assembly; Digital dermatitis; lipoproteins;

    Abstract : In this study, a draft genome assembly of Treponema phagedenis-like strain V1 was obtained using Mira3 assembler. T. phagedenis-like strain V1 was isolated and characterized from a digital dermatitis lesions, a skin disease causing lameness in cattle. READ MORE