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  1. 1. Unsupervised hidden Markov model for automatic analysis of expressed sequence tags

    University essay from Bioinformatik

    Author : Andrei Alexsson; [2011]
    Keywords : Machine learning; Markov Model; Hidden Markov Model; Expressed sequence tag; EST; Baum-Welch; 1-best; Unsupervised; Supervised; GHMM;

    Abstract : This thesis provides an in-depth analyze of expressed sequence tags (EST) that represent pieces of eukaryotic mRNA by using unsupervised hidden Markov model (HMM). ESTs are short nucleotide sequences that are used primarily for rapid identificationof new genes with potential coding regions (CDS). READ MORE