Essays about: "linked-read sequencing"

Found 3 essays containing the words linked-read sequencing.

1. 1. Development and validation of bioinformatic methods for GRC assembly and annotation

   University essay from Uppsala universitet/Institutionen för biologisk grundutbildning

   Author : Roberto Rossini; [2020]
   Keywords : GRC; Germline restricted chromosome; kFish; assembly;

   Abstract : This thesis presents the work done during my master degree projects under the supervision of Alexander Suh and Francisco J. Ruiz-Ruano. My work focused on the development of in-silico methods to improve the assembly of the Germline Restricted Chromosome (GRC) of songbirds, more specifically that of zebra finch. READ MORE

3. 2. SVenX: A highly parallelized pipeline for structural variation detection using linked read whole genome sequencing data

   University essay from Lunds universitet/Examensarbeten i bioinformatik

   Author : Vanja Börjesson; [2018]
   Keywords : Biology and Life Sciences;

   Abstract : Genomic rearrangements larger than 50 bp are called structural variants. As a group, they affect the phenotypic diversity among humans and have been associated with many human disorders including neurodevelopmental disorder and cancer. READ MORE

4. 3. Resolving metagenomes usingsingle-molecule linked-readsequencing

   University essay from KTH/Skolan för kemi, bioteknologi och hälsa (CBH)

   Author : Jennifer Theland; [2018]
   Keywords : DNA sequencing; linked-read sequencing; DB-Seq; metagenomics; de novo assembly;

   Abstract : The development of Massively Parallel Sequencing (MPS) has enabled more accurate and less time-consuming DNA sequencing. Although MPS technologies are theoretically applicable to all samples and species, the majority of studies on microorganisms have been conducted on those able to be isolated and cultivated in laboratories. READ MORE