Essays about: "protein data bank"

Found 4 essays containing the words protein data bank.

  1. 1. PePIP : a Pipeline for Peptide-Protein Interaction-site Prediction

    University essay from Linköpings universitet/Institutionen för fysik, kemi och biologi

    Author : Isak Johansson-Åkhe; [2017]
    Keywords : PPI; Protein-protein interaction; Protein-peptide interaction; Random forest; Bioinformatics; Binding-site prediction; Structural Alignment;

    Abstract : Protein-peptide interactions play a major role in several biological processes, such as cellproliferation and cancer cell life-cycles. Accurate computational methods for predictingprotein-protein interactions exist, but few of these method can be extended to predictinginteractions between a protein and a particularly small or intrinsically disordered peptide. READ MORE

  2. 2. Analysis of transmembrane and globular protein depending on their solvent energy

    University essay from Institutionen för vård och natur

    Author : Sachin Wakadkar; [2009]
    Keywords : ;

    Abstract : The number of experimentally determined protein structures in the protein data bank (PDB) is continuously increasing. The common features like; cellular location, function, topology, primary structure, secondary structure, tertiary structure, domains or fold are used to classify them. READ MORE

  3. 3. Structural characterization of overrepresented

    University essay from Institutionen för fysik, kemi och biologi

    Author : Fredrik Lysholm; [2008]
    Keywords : bioinformatics; structural; classification; sequence; patterns; overrepresented; pentapeptide;

    Abstract : Background: Through the last decades vast amount of sequence information have been produced by various protein sequencing projects, which enables studies of sequential patterns. One of the bestknown efforts to chart short peptide sequences is the Prosite pattern data bank. READ MORE

  4. 4. Using a Rule-System as Mediator for Heterogeneous Databases, exemplified in a Bioinformatics Use Case

    University essay from Institutionen för kommunikation och information

    Author : Anna Schroiff; [2005]
    Keywords : ECA rules; SCOP; PDB; databases; update propagation;

    Abstract : Databases nowadays used in all kinds of application areas often differ greatly in a number of properties. These varieties add complexity to the handling of databases, especially when two or more different databases are dependent. READ MORE