Essays about: "single nucleotide polymorphism"

Showing result 21 - 25 of 40 essays containing the words single nucleotide polymorphism.

  1. 21. Dispersal of young-of-the-year brown trout (Salmo trutta L.) from spawning beds : effects of parental contribution, body length and habitat

    University essay from SLU/Dept. of Wildlife, Fish and Environmental Studies

    Author : Susanna Andersson; [2016]
    Keywords : egg stocking; electrofishing; SNP; dispersal distances; habitat preferences;

    Abstract : Stocking of brown trout eggs Salmo trutta L. and construction of spawning beds are common measures in habitat restored streams. However, knowledge about how young-ofthe-year (YOY) trout disperse from stocking points and spawning beds, and how it relates to biotic and abiotic factors, are sparse. READ MORE

  3. 22. Strålbenshälta hos häst - vilka är de genetiska faktorerna bakom detta hälsoproblem?

    University essay from SLU/Dept. of Animal Breeding and Genetics

    Author : Jasmine Lindholm; [2015]
    Keywords : strålbenshälta; frambenshälta; diagnos; genetik; ärftlighet; genomsekvensering; genetiska markörer; mikrosatellit; enbaspolymorfi SNP ; navicular disease; forelimb lameness; diagnosis; genetics; heredity; whole genome sequencing; genetic markers; microsatellite; Single Nucleotide Polymorfism SNP ;

    Abstract : Denna litteraturstudie behandlar strålbenshälta hos häst, även känd som Navicular disease (ND). Studien beskriver sjukdomen och dess karaktäristiska drag, samt belyser de två huvudsakliga teorierna om den bakomliggande orsaken till insjuknandet. READ MORE

  4. 23. Design of an in-silico workflow to trace the spread of zoonotic bacteria using NGS data

    University essay from SLU/Dept. of Animal Breeding and Genetics

    Author : Adrien Janssens; [2015]
    Keywords : Salmonella enterica; next generation sequencing; genotyping; GATK; single nucleotide polymorphism; traceability; clustering;

    Abstract : Tracing the spread of foodborne illness to analyze and prevent future outbreaks has become a major subject of the food-producing industry and the national food agency these past decades, and one of the main worries of the veterinarian sector. Methods for comparing bacterial strains for this purpose have generally required substantial manual effort, and have provided insufficient information. READ MORE

  5. 24. Genome wide association study of milk composition traits in Swedish Red cows

    University essay from SLU/Dept. of Animal Breeding and Genetics

    Author : Yohannes Goitom Tesfayonas; [2014]
    Keywords : Milk composition; single nucleotide polymorphism SNP ; GWAS;

    Abstract : The aim of this study was to detect QTLs that affect milk composition traits such as fat yield, fat percent, citric acid, free fatty acids as well as milk properties like fat globule size, and determine the phenotypic variation explained by the QTLs. These traits play a crucial role in nutritional and technological properties of milk and its products. READ MORE

  6. 25. Variant Calling and Microarray Expression Analysis in Pancreatic Islet Samples

    University essay from Lunds universitet/Examensarbeten i bioinformatik

    Author : Olof Asplund; [2014]
    Keywords : Biology and Life Sciences;

    Abstract : Abstract This article describes the creation of a pipeline for variant calling from high-throughput next-generation exome and RNA sequencing data using commonly used bioinformatics tools. High-throughput sequencing data from six pancreatic islet cell samples were analyzed using the pipeline, and the resulting variant calls were validated against chip genotyping data from the same individuals. READ MORE