Genome-wide association studies on body weight and component traits in an intercross of two divergently selected chicken lines

University essay from Uppsala universitet/Institutionen för biologisk grundutbildning

Abstract: Here we present the genome-wide association study of body weight at 8 weeks of age based onthe advanced intercross pedigree of two chicken lines gone through bi-directional selection.With improved marker density (~3M SNPs) and larger sample size (2667 individuals from F2-F15), 34 loci with suggestive significance are detected, of which 18 loci are novel, and the rest17 loci are consistent with the results of previous quantitative trait locus mapping studies onthis trait with smaller number of genetic markers and fewer individuals. The component traits,referring to traits related to body weight and possibly contributing to the body weight as well,are also measured and analysed. The combined result showed that one locus with significantmarginal effect on BW8 is associated with early growth, breast muscle development and shankdevelopment, while another locus with late development and bursa development.

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