Essays about: "Genome analysis"

Showing result 1 - 5 of 169 essays containing the words Genome analysis.

  1. 1. Parentage Assignment using genetic markers in the common carp (Cyprinus carpio)

    University essay from SLU/Dept. of Animal Breeding and Genetics

    Author : Sven Kristian Feddersen; [2023]
    Keywords : single nucleotide polymorphism; Parentage Assignment; aquaculture; genetic markers;

    Abstract : This study investigated the effect of varying single nucleotide polymorphisms (SNPs) marker density, error threshold selection, and different SNP selection strategies on parentage assignment accuracy in carp populations. Using a marker set of 15,615 SNPs, we found a positive correlation between the quantity of SNP markers and the accuracy of parentage assignments, consistent with existing literature. READ MORE

  3. 2. Integrative Approaches Illuminate Evolutionary Divergence in the Bar-tailed Lark Complex ( Ammomanes cinctura)

    University essay from Uppsala universitet/Institutionen för biologisk grundutbildning

    Author : Zongzhuang Liu; [2023]
    Keywords : Alaudidae; Ammomanes cinctura; Integrative taxonomy; Genomics; Plumage; Evolutionary divergence;

    Abstract : Ammomanes cinctura (Bar-tailed Lark) is a lark species with a wide distribution in the Palearctic. One of its subspecies, A. c. READ MORE

  4. 3. Exploring the genetic cause of myotonic dystrophy in horses

    University essay from SLU/Dept. of Animal Breeding and Genetics

    Author : Thomas Simon; [2023]
    Keywords : genetics; bioinformatics; myotonic dystrophy; horses; variant analysis;

    Abstract : Myotonic Dystrophy (MD) is an inherited neuromuscular disorder that leads to a wide range of clinical signs including stiffness, abnormal muscle relaxation, and muscle atrophy or hypertrophy. Affected muscles develop a prolonged contracture in response to percussion of the muscle and show waxing and waning complex repetitive discharges in electromyography (EMG). READ MORE

  5. 4. The gut microbiome and nausea in pregnancy

    University essay from Uppsala universitet/Institutionen för biologisk grundutbildning

    Author : Clàudia González Valdivia; [2023]
    Keywords : Bioinformatics; Microbiome; Metagenomics; Genome analysis; Genetics;

    Abstract : Nausea and vomiting are among the most common symptoms of early pregnancy. Its most extreme form Hyperemesis gravidarum often requires hospitalization and has been linked as a risk factor of perinatal depression. READ MORE

  6. 5. SubKluster: Novel method to bin scaffolds from cereal genomes into subgenomes using substring frequency analysis

    University essay from Lunds universitet/Examensarbeten i bioinformatik

    Author : Victor Kalbskopf; [2023]
    Keywords : Biology and Life Sciences;

    Abstract : The genome of the Belinda variety of the hexaploid oat (Avena sativa) has recently been sequenced and assembled. This project aims to improve the assembly by clustering the thousands of scaffolds into their three ancestral subgenomes using Principle Component Analysis (PCA) of kmer and repeat-element frequencies. READ MORE