Essays about: "wgs"

Showing result 11 - 15 of 22 essays containing the word wgs.

  1. 11. Exploring the impact of estrogen signaling on gut microbiota diversity in a diet-induced obesity and a colorectal cancer model

    University essay from KTH/Proteinvetenskap

    Author : Lina Stepanauskaite; [2021]
    Keywords : colorectal cancer; gut microbiome; whole genome analysis; estrogen; high-fat diet;

    Abstract : Colorectal cancer (CRC) is one of the most common and deadly cancers in the western world. The incidence of CRC shows the tendency to rise with the increase of obesity, which is caused by current increase in fat intake, suggesting the correlation between CRC and high-fat diet (HFD). READ MORE

  3. 12. Evaluation of the new Power & Biomass to Liquid (PBtL) concept for production of biofuels from woody biomass

    University essay from KTH/Kemiteknik

    Author : Robert Dahl; [2021]
    Keywords : PBtL; Fischer-Tropsch Synthesis; Biofuels; ASF product distribution; Aspen Plus; PBtL; Fischer-Tropsch syntes; Biobränslen; ASF produktfördelning; Aspen Plus;

    Abstract : I den här rapporten utvärderas det nya konceptet Power & Biomass to Liquid (PBtL). PBtL är ett alternativ till den tidigare och mer etablerade Biomass to Liquid (BtL) processen. Med PBtL förbättras utbytet av kol jämfört med BtL genom att elektricitet läggs till i processen. READ MORE

  4. 13. Next-generation diagnostics of escherichia coli from community-onset sepsis patients in sweden : Studying the biodiversity of escherichia coli genomes

    University essay from Högskolan i Skövde/Institutionen för biovetenskap

    Author : Nada Mahmoud; [2021]
    Keywords : ;

    Abstract : Escherichia coli (E. coli) is among the gram-negative bacteria that can cause several infections including sepsis. Confirmed sepsis patients must show a sequential organ failure assessment (SOFA) score of ≥2 with verified infection. Understanding the genotypic characteristics of E. READ MORE

  5. 14. ARG-MATEE Automated Pipeline for Detection of Antimicrobial Resistance in WGS Data Collected from Pig Farms and Surrounding Communities

    University essay from Uppsala universitet/Institutionen för biologisk grundutbildning

    Author : Holly Halstead; [2020]
    Keywords : Bioinformatics; Microbiology; Pipeline; Snakemake; ARG-MATEE; Antimicrobial Resistance; Pig Farms; Conda; iss virulence gene; Thailand; surveillance; escherichia coli; E. coli; klebsiella pneumoniae; One Health;

    Abstract : As part of recognizing the interconnected nature of different sectors in relation to health, AMR (antimicrobial resistance) has emerged as an issue of high global importance. E. coli isolates were taken from pig farms in Thailand, which serves as a point of interest in the study of ARGs (antimicrobial resistance genes) in emerging economies. READ MORE

  6. 15. Whole-Genome Sequencing of two Swedish Individuals on PromethION

    University essay from Lunds universitet/Examensarbeten i bioinformatik

    Author : Nazeefa Fatima; [2019]
    Keywords : Biology and Life Sciences;

    Abstract : Background: Chromosomes can undergo various changes such as deletions, inversions, insertions, and/or translocations resulting in structural variation differences between individuals. Structural variants are a common source of variability in the human genome and have been known to be associated with common diseases such as autism, cancer, and rare human diseases [1, 2]. READ MORE